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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908296.1_cds_XP_016458402.1_52034
CDS Infomation

[gene=LOC107782085] [db_xref=GeneID:107782085] [protein=protein PHR1-LIKE 1-like] [protein_id=XP_016458402.1] [location=join(4481..5098,5699..5873,5959..6035,6123..6162,6480..6537,7020..7089,9499..9861)] [gbkey=CDS]
Sequence

ATGCGGCCTGCATTATATATGCCAAGATCTAGTGAAGCACAGCACAATAGCATGGGTGTC
TCTGGAACTACGCCAACGTCTTTACCCAGTTTGCCCAAATTGGAGGAGAGATTTCCCAAA
TTGCCAGATTCTCTTCATGTTATCTCGGAGAAGGAGCTAACTGCAAGCTTCATTTCTCCA
CGGGCAATTTCATCGACATCTAAGAGTGGAACAGTTGGGCACCTATTGTCGTCCACTTCT
GGACCCCACAGAGATTTTCACTTTTTACCTTCCTCTCCTCAAGAAACTCGGCCACGTTAC
TATCCATTTATCTCAAGTGGGGCTTCTATGTCAACCAGCCAAGCTTCACGCTCAAGTTTA
CATTCTACCTCGTTGAATACCAACCCCTTGGGGAACCACAAACAGAATTCATTTCATGAG
TTTCTTGCTTTTCCTCCAAATGTTCCTGTTCAAAATGGCCAAGTGGAAAGCCTTGCCAGC
GTCATGGCATCCGATGATGGTGTTAAGAGATCTGATTGGCAAGACTGGGCTGATCAGCTA
ATTAACGATGATGACACTCTCGGTTCAAGCTGGAGTGATATCCTATTAGATGTCAATTTT
CCAGATCCAGAACCTAAGCTGTCTGAGATCCCTGCAAAACAGCCGCAACTTCCTCCTCCT
GCTCCTGCTTCATCGGGGCAAAGCTGCCCAGTTGGTAGCCCATCATCTTCCACATCTAAG
CCTCGAATGAGGTGGACGCCAGAGCTTCACGAAGTCTTTGTAGAAGCTGTCAATAAGCTT
GGTGGCAGCGAAAAAGCTACTCCGAAGGGTGTCTTGAAGCTCATGAACGTGGAAAGCTTA
ACCATCTATCATGTTAAAAGCCACTTGCAGAAATATAGGACTGCCAGATACAAACCAGAT
CCCTCTGAAGGAATTTCAGAAAAGAAGCCAACTATCGTCACGGAGATGCCATCTCTGGAC
TTAAAAACGACTATGGGAATAACAGAAGCATTGAAAATGCAGATGGAAGTGCAGAAGCAG
CTTCATGAACAACTTGAGATCCAAAGAAAGTTACAACTGCGGATTGAAGAACAGGGGAAA
TACCTTCAAATGATGTTTGAGAAGACGAAAAACATGGGGAAAGAACTAAATGTGTCATCA
TCAAAATCAGATGAACCTCCTTCACCATCCACAGAACTAAAACATTCCCCTCCTGATGAT
AAATCAGATGCCTCCGAGCAGGATCATGTCAGCATTGGACATGGTTCAGGTGATGCTTCA
AGATCTCTGGAGGATCTTTCCAAGAACAATGAACGAAAGTTGCCCAAAAGGAAAGCTTGT
GAGAATCATGGCTTGGACGTTAGAGACTTAAGTTCCCTTACAACAGAAGGTGCAAAATCG
GAGGAAATGTTACCTTCATGA

Peptide Sequence

PEP ID

XP_016458402.1
PEP Infomation

PREDICTED: protein PHR1-LIKE 1-like [Nicotiana tabacum]
Sequence

MRPALYMPRSSEAQHNSMGVSGTTPTSLPSLPKLEERFPKLPDSLHVISEKELTASFISP
RAISSTSKSGTVGHLLSSTSGPHRDFHFLPSSPQETRPRYYPFISSGASMSTSQASRSSL
HSTSLNTNPLGNHKQNSFHEFLAFPPNVPVQNGQVESLASVMASDDGVKRSDWQDWADQL
INDDDTLGSSWSDILLDVNFPDPEPKLSEIPAKQPQLPPPAPASSGQSCPVGSPSSSTSK
PRMRWTPELHEVFVEAVNKLGGSEKATPKGVLKLMNVESLTIYHVKSHLQKYRTARYKPD
PSEGISEKKPTIVTEMPSLDLKTTMGITEALKMQMEVQKQLHEQLEIQRKLQLRIEEQGK
YLQMMFEKTKNMGKELNVSSSKSDEPPSPSTELKHSPPDDKSDASEQDHVSIGHGSGDAS
RSLEDLSKNNERKLPKRKACENHGLDVRDLSSLTTEGAKSEEMLPS

Transcript Sequence

Gene sequence data has not been registered.